Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
3S6P Chain:E ((1-33))
-------------------------FAAAVSAFAANMLSSVLKSEATSSIIKSVGETA----------------------
General information:
TITO was launched using:
RESULT:
Template:
3S6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4119 for 126 contacts (32.7/contact) +
2D Compatibility (PS) -3610 + (NN) -614 + (LL) 2924
1D Compatibility (HY) -400 + (ID) 300
Total energy: 2119.0 ( 16.82 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3S6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S6P-query.scw
PDB file :
Tito_Scwrl_3S6P.pdb
: