Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPRPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIKP
2GXG Chain:A ((7-141))
---NRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATS-DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRI-
General information:
TITO was launched using:
RESULT:
Template:
2GXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63997 for 858 contacts (-74.6/contact) +
2D Compatibility (PS) -14725 + (NN) -8155 + (LL) 212
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -93665.0 ( -109.17 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_2GXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GXG-query.scw
PDB file :
Tito_Scwrl_2GXG.pdb
: