Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MFRPRLLLTSLAIAL-------------GACSPQDPQAVTSAALAQQV--ILPTYSR-WVEADQALAS-SALAYCQGKEDLAKARDAFHAAQKAWAELQPLLIGPLAE----GNRAWQV----------QFWP---DKKDLVGRQVEQLLKNNPQVDAAALAK----------------A-SVVVQGLSAY-E-YILFD-SKIDLADAATKARYCPLLEAIGTHQQQLAQDILARWKNDGG---MLTQMSKFP------NDRYADAHEAI-AELLRVQVTALDMLKKKLGTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGI---DGKGLKT-LLPAE-QKDLAGKIDA--AYADSH----AKLAALEQKPLSE-LLASEDGRNQLNALYDSLNVVHRLH-EGDLARALGVQLGFNANDGD |
| 4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIV-----SFLEKA-DRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWRE---VDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHY-KGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTG------------LLWKLFMSHPDVQAGLTKLGFNTN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38601 for 2530 contacts (-15.3/contact) +
2D Compatibility (PS) -34598 + (NN) -14751 + (LL) 304
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -104246.0 ( -41.20 by residue)
QMean score : 0.176
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