Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAILHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRSADLQGLRRTHFHAFFRRLHDGMFRRQGRPDALGGALDELLGDCRLLCFDEFHVHDIGDAMLITRLFRELFGR-KITLVCTSNYAPRQLLPNPLYHERFLPAIRLIETRMEVLEVAGARDYRTISPRQEIASGYASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCEAPTAVMDYLALGERFSTWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKALPDLVEGSDLPADMQRTASRLAQLRQLRC |
2KJQ Chain:A ((1-149)) | --------------------------MGHHHHHHSHMDYPSFDKFLGTENAELVYVLR---HKHGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFE------------------AEYLAVDQVEKLGNEEQALLFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKP------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82845 for 1028 contacts (-80.6/contact) +
2D Compatibility (PS) -15324 + (NN) -2841 + (LL) 14052
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -91958.0 ( -89.45 by residue)
QMean score : 0.343
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