Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLL--AATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVEL--GSMP--VMRIISQ-ATRVIAEGEVL-QLSKVRDASTTEE--TYMEVIRG-KTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGGSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH |
| 3KRO Chain:D ((37-271)) | -------------------------------------YSLLAGGKRVRPMLCIAACELVG--GDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQ------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51364 for 1757 contacts (-29.2/contact) +
2D Compatibility (PS) -23978 + (NN) -12139 + (LL) 8004
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -97527.0 ( -55.51 by residue)
QMean score : 0.290
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