Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-------AYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQ---GLPGHEGLFYD-SLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIPGMVLGELDIGPTTG--RVITAIGNGE-MTHYV-------AGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
2RH8 Chain:A ((9-336)) | -----------KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHF--------IKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDI---PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYK---VPTDF--------------GD-FP---------PKSKLIISSEKLVK-EGFSFKYGIEEIYDESVEYFKAKGLL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214622 for 2448 contacts (-87.7/contact) +
2D Compatibility (PS) -31776 + (NN) -10989 + (LL) 3676
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -264961.0 ( -108.24 by residue)
QMean score : 0.404
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