Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFVFAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGFRITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPLGTGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQVRL-AQGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS |
2VQ2 Chain:A ((42-140)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1073 for 746 contacts (-1.4/contact) +
2D Compatibility (PS) -11608 + (NN) -13169 + (LL) 4824
1D Compatibility (HY) -800 + (ID) 850
Total energy: -22676.0 ( -30.40 by residue)
QMean score : 0.649
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