Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQIQRDIAQALQVQPPFQSEADVQAQIARRIAFIQQCLKDSGLKT----LVLGISGGVDSLTAGLLAQRAVEQLREQTGDQAYRFIAVRLPYQVQQDEADAQASLATIRA--DEEQTVNIGPSVKALAEQLEALEGLEPAKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVRALARALGAPENLVEKIPTADLEDLRPGHPDEASHGVTYAEIDAFLHGQPLREEAARVIVDTYHKTQHKRELPKAP |
3FIU Chain:B ((18-247)) | ------------------------------------NWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVK--------TGLPT---TALILPSDNNQHQ-DMQDALELIEMLNIEHYTISIQPAYEAFLASTQSFT------QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQ---GQTDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45731 for 1717 contacts (-26.6/contact) +
2D Compatibility (PS) -23759 + (NN) -12308 + (LL) 5900
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -95148.0 ( -55.42 by residue)
QMean score : 0.531
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