Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAGEA
1P9I Chain:A ((3-31))
----------------------------------------------------------------QLNALLASLEAENKQLKAKVEELLAKVGE-----------
General information:
TITO was launched using:
RESULT:
Template:
1P9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3272 for 106 contacts (30.9/contact) +
2D Compatibility (PS) -3326 + (NN) -1430 + (LL) 5180
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 1296.0 ( 12.23 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_1P9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9I-query.scw
PDB file :
Tito_Scwrl_1P9I.pdb
: