Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCERE-APPAVIFCTA-HDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGVRRLMHQL
1RNL Chain:A ((7-146))
-TILLIDDHPMLRTGVKQLISMAPDITVV-GEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALT------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RNL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89542 for 936 contacts (-95.7/contact) +
2D Compatibility (PS) -13969 + (NN) -9416 + (LL) 9136
1D Compatibility (HY) -10800 + (ID) 2350
Total energy: -116941.0 ( -124.94 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_1RNL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RNL-query.scw
PDB file :
Tito_Scwrl_1RNL.pdb
: