Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANANKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWK---RPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
| 3M9L Chain:A ((69-174)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLE----AIGLA--DCFAEADVLG---------------RD-------------------EAPPKPHPGGLLKLAEAWDVSPSRMVMVGDY-RFDLDCGRAAG---TRTVLVNLPD--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45997 for 704 contacts (-65.3/contact) +
2D Compatibility (PS) -11440 + (NN) -5524 + (LL) 17088
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -51073.0 ( -72.55 by residue)
QMean score : 0.245
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