Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGR---SY-----SKPMLS---------TG----FS---KNKDADGLAM----------AEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTEL--AFAAGLAVN--RGIVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPS-QVAYGPMPVTVKTPACPLVVSPPPRGMDGQW----L---V----------EGSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNKELPGLMA |
| 3O0H Chain:A ((24-440)) | -SFDFDLFVIGSGSGGVRAARLAGALG--KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYE-SRAVFVDEHTLELSVTGERISAEKILIATGAKIVSN-IKGSD--LCLTSNEIFDLE------KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGH----IQLTPVAIHDAMCFVKNAFE---TTPDYDLITTAVFSQP-EIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260445 for 2944 contacts (-88.5/contact) +
2D Compatibility (PS) -37713 + (NN) -11867 + (LL) 1156
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -326419.0 ( -110.88 by residue)
QMean score : 0.408
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