Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQALLFLMALLLPSRAGAEEIIGGVESEPHSRPYMAYVNTFSKKGYVAICGGFLIAPQFVMTAAHCSGRRMTVTLGAHNVRKRECTQQKIKVEKYILPPNYNVSSKFNDIVLLKLKKQANLTSAVDVVPLPGPSDFAKPGTMCWAAGWGRTGVKKSISHTLREVELKIVGEKACKI-FRHYKDSLQICVGSSTKVASVYMGDSGGPLLCAGVAHGIVSSGRGNAKPPAIFTRISPHVPWINRVIKGE
1CGH Chain:A ((1-224))--------------------IIGGRESRPHSRPYMAYLQIQSPAG-QSRCGGFLVREDFVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMR-RGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMRS-


General information:
TITO was launched using:
RESULT:

Template: 1CGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172959 for 1891 contacts (-91.5/contact) +
2D Compatibility (PS) -24595 + (NN) -14503 + (LL) 2528
1D Compatibility (HY) -14000 + (ID) 5300
Total energy: -228829.0 ( -121.01 by residue)
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_1CGH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CGH-query.scw
PDB file : Tito_Scwrl_1CGH.pdb: