Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEEPVEKKWRIKRSAARFLAVQVAYSNIFMGYDKSTFELENCGLRNYVGKLADIFECEEFDYQFLEKLLYKVIRSGGEYDKIIEYYLHPSWSLLRLNLVSLSILRVAVCELANC-DTPAPVVINEYTNIASDLLDKPSEIGFINGLLDKAKSAVKLNKNS
1EYV Chain:A ((9-139))
------------GRHQARKRAVALLFEAEVRGISAAEVV--DTRAA-----LAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHL-RGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTD-DSPGFVNGVLGQVM---------
General information:
TITO was launched using:
RESULT:
Template:
1EYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74597 for 1008 contacts (-74.0/contact) +
2D Compatibility (PS) -13496 + (NN) -1449 + (LL) 1968
1D Compatibility (HY) -3600 + (ID) 1850
Total energy: -93024.0 ( -92.29 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_1EYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYV-query.scw
PDB file :
Tito_Scwrl_1EYV.pdb
: