Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHLFCFG-YGYVARFLSKKLLSLSWKVSGTSRNQDVHNTNFFNYDKVN-KDTFQ--DVTHVLVSIPPDGDDALERYGHY----FQNTKWLGYLSAASVYGDHAGNWVKEESETKPIESRGKSRLRAEKKWLNSKLPVHIFRLTGIYGPGRNV----LVDLQ---L-NKARNVQKEGHFFSRIHVEDISNILFSSMQNI----KPGEIYNCADDLPATQSEVVAYAAELLNVSVPEPVEISSLPDHAQSFYLGSKKVSNIKVKRDLGISLVYPNYKVGLENLISNQQAPIERGE |
| 2YDY Chain:A ((3-298)) | RRVLVTGATGLLGRAVHKEFQQNNWHAVGCG-----------------VHHIIHDFQPHVIVHCA-------VDASGNLAKEAAAVGAFLIYISSDYVFDGTN-PPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITD-SPVLGAQRPRNAQLDCSKLE-TLGIGQRT-PFRIGIKESLWPFLI------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119006 for 1958 contacts (-60.8/contact) +
2D Compatibility (PS) -25793 + (NN) -10196 + (LL) 196
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -161849.0 ( -82.66 by residue)
QMean score : 0.398
|
|
|