Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYNHPKYKLELVKFN-N--WPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVAL-GHHEGNVIMGQKGMHLNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGY-SVAEPFGALGEKLGKGKTLKHGDDVIPDAYC-CVLVLRGELLDQHKDVAQAFVQDYKKSGFKMNDRKQSVDIMTHHFK--QSRDVLTQSAAWTSYGDLTIKP--------SGYQEITTLVKQHHLFNPPAYDDF-VEPSLYKEASRS--------------- |
| 3UIF Chain:A ((2-331)) | VEDLKVVRIASVATNVG----------------------GKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAAMASVGPVINEGFASGKIDFGIYGDLPPIILNASKPTVQLVAPWGTTSNSYLVVPKNSTAKSIKDLKGKKIALHRGRPWELAFSNLLQSE-GLTFKDFKIVNVNPQVGAAALASGTVDGFFSLFDSYILEDRGVGKIIWSTKTAPVDWKL--MGGVWARNDFVKQNPEITQAIVTAYLKSVHWVAQDENKETYIREYSNKIYPESVNRREYDQDNVSWRQRWSPLYDVALQEHYRKAVAYAQASGLTRTQADVQQMLNPHFVATALKELKLEGFWTPNAENLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81173 for 2440 contacts (-33.3/contact) +
2D Compatibility (PS) -32239 + (NN) -16800 + (LL) 1776
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -139036.0 ( -56.98 by residue)
QMean score : 0.383
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