Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALDKKVYATINGFPF----NSQLKLLEEHLYKMAELEPDAFIIAAPGVIKLASKIAPHIPVHLSTQANVLNTLDAQ-----VFYDLGVKRIVCARELSLNDAVEIKKALPDLELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSGHIAEILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSF-YASELNTLKNRGFTDGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKF--TTTTNTAYEIIAPKNAAI-TPIVNDIGKIYTFEKRSYLVLYKILLENNTELETIHSG-NVNLVRLPAPLP-AFSFLRTQVRV |
| 4Q9T Chain:A ((12-446)) | TKILTETEKYSVTKLSTDLSFLPFEGLVDTALQKALVNDLDHIYIWNYNSIQKDTPICKISLHSSPPICLFT-SSINGICIINKKNSQFLYFED--------------------ISTINNLAHVLDLKLKDNENITSTINCEPSGIIIATSLGRVLFITIKDSTGKPKLELKQQLIKPQNSFFFRN-----LDSSKEIISLKKGPIVGKG--------ERLLYITTRGGSLQIWQL---SINSKSFKRLEINIYEHVLDSLQDLYPFAHG-TLAFLDSHPIYSDTSSAHLTLASISNGNEIYYLMITVILDEK-----TNSFQIFSIY-KLNTYFTKSTVD---------LNHKPQLFIPNALDSIVSPTLSVYVLFNNAVVMTQISSKLDSSFPLRRK-----WEDIIRFNKDVEIIGSGYSTDSIYVICK-DMGVLKIASH--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59142 for 2735 contacts (-21.6/contact) +
2D Compatibility (PS) -36760 + (NN) 11927 + (LL) 4740
1D Compatibility (HY) -14400 + (ID) 2650
Total energy: -96285.0 ( -35.20 by residue)
QMean score : 0.196
|
|
|