Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILLTNDDGYHAKGIKALEQALENMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNVFTKGYPLKGRKLLNVNVPNCSLQEYKGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLKWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK |
4XGP Chain:C ((16-257)) | --RILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGD---IAVQMGTPTDCVYLGVNALMRPRP-DIVVSGINAGPNLGDDVIYSGTVAAAMAGRHLGFPALAVSL-------NGYQHYDTAAAVTCALLRGLSRE--PLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPD----TDFAAVDEGYVSVTPLHVDLTAASAHDVVSDWLDSVGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75407 for 2032 contacts (-37.1/contact) +
2D Compatibility (PS) -25651 + (NN) -2042 + (LL) 920
1D Compatibility (HY) -18400 + (ID) 4650
Total energy: -125230.0 ( -61.63 by residue)
QMean score : 0.408
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