Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEHAIALAKNHPDLFIGQHTNFLLGKPCANPAEIPSLVDENGEF---HRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKKWSDQEGYLPITKLLESGALPYTNGGVSVENFLN------------DDFGLLKLAPNEIAEMHFDVGFLDQF-VLDNSSYTL-----------MRCRELATICDVRVRDWLLENGFE-------LITFGDLQR------------------------------------------------------------- |
| 4NZR Chain:M ((26-416)) | NDGSYQSEIDLSGGANFREKFRNFANELSEAITNSPKGLDRPVPKTEISGLIKTGDNFITPSFKAGYYDHVASDGSLLSYYQSTEYFNNRVLMPILQTTN---GTLMANNRGYDDVFRQVPSFSGWSNTKATTVSTSNNLTYDKWTYFAAKGSPLYDSYPNHFFEDVKTLAIDAKDISALKTTIDSEKPTYLIIRGLSGNGSQLNELQLPESVKKVSLYGDYTGVNVAKQIFANVVELEFYSTSKANSFGFNPLVLGSKTNVIYDLFASKPFTHIDLTQVTLQNSDNSAIDANKLKQAVGDIYNYRRFERQFQGYFAGGYIDKYLVKNVNTNKDSDDDLVYRSLKELNLHLEEAYREGDNTYYRVNENYYPGASIYENERASRDSEFQNEILKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7793 for 1853 contacts (4.2/contact) +
2D Compatibility (PS) -26535 + (NN) -2980 + (LL) 484
1D Compatibility (HY) -2800 + (ID) 2250
Total energy: -26288.0 ( -14.19 by residue)
QMean score : 0.096
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