Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKKLTVGGKFDWYIDTLEKSGMFILELSNEEIETFIFEDFIVGVTSFFSKNNLSELKANEIIDEDMEKNAYLLREKVL--KIDNTDLWNINSVRQSSEWL-DIFRRSDELKRQLKERWSDEEIEYLKTL------ |
| 4BFA Chain:A ((22-338)) | ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWD------WQSAQQCMAISG-------CDAVMIG-RGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25335 for 732 contacts (34.6/contact) +
2D Compatibility (PS) -12104 + (NN) -5726 + (LL) 1700
1D Compatibility (HY) -4400 + (ID) 900
Total energy: 3905.0 ( 5.33 by residue)
QMean score : 0.270
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