Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MSELVM--DSAFFGHVLQDMGALI---EKERDYLTGLDSDIGDGDHGINLSIGFREV-NKQLDE-LLAVSPDI----------------ATLLKKSGMILLGKVGGASGPLYGSFFMK---CGADIPGKTEVNFDELCG-------MIINGAAAVQHRGKAELGD-KTMMDAFLPGVEVLQNRDANAEPIETFS---TFVDAMHAGAQSTIPLIAKKG-RALRLG--ERAIGHLDPGSESSWMLMNIIL--------------ENLKKAV----- |
| 4PHR Chain:A ((1-277)) | SEFELMKRLSEIKVLPILESLKYIKHNHASVVRFGDGEIDLMTG--HSIPYQDYNEKLAKRLQQILQTKSDEKLLVCLPDVFSNMDRYNQNARHFWERHFLKYSEFYLNC----CDAPFYGSTFISRPYIDLIDKSPSEAYFESLKELWRGKDLLIVEGATSRSGVGNDLFVAASSIKRLVCPSKNAFQYYDEILRLTEKNAKNRLILVMLGPTAKVLVADLTTKGYQAIDLGHIDSEYEWYEMGATYKVKLTNKHTAEFNYDEGIELEFSQEYQEQIVARIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67933 for 1566 contacts (-43.4/contact) +
2D Compatibility (PS) -22092 + (NN) -3065 + (LL) 12
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -105678.0 ( -67.48 by residue)
QMean score : 0.232
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