Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNP-KT-ATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKF-YDSYLYGHGCHTIDQVLSYFGK-PDNIHYDVRQLLGEGRMNDYFDLDLYYG-VTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKP--KQVTDEETLLQMEILEKGVEACK |
| 3EVN Chain:A ((5-320)) | KVRYGVVSTAKVAPR-FIEGVRLAGNGEVVAVSSRTLESAQA---KYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNID-HVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTAT-F-PKGQSDSQSKLLLQLSNGVLVDIFLTTRLN-LPHEMIIYGTEGRLIIPHFWKT-THAKL--VRND--------TSA------------RTI-QVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130950 for 2625 contacts (-49.9/contact) +
2D Compatibility (PS) -33200 + (NN) -11932 + (LL) 1648
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -189234.0 ( -72.09 by residue)
QMean score : 0.479
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