Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MLSTAKERQLKIVNRLKVEQFMRIIDL-VEFVNYSEATVKRDLVELEKEGLVRRTRGGAMIIDNKKIDLPYLMKMNERSNETSKIRIADIAKSLIRDDMVIFLDSS-STSLHLIDVLSKFDGL-QIITNGVMTASMLSEFTNARVSILGGSILTKRYTVNGAKAYNDALTYNADIAFVSCRGIDYDKGATETHEGEALIKQAFRRQSSSLVLLVTEEKVGHKFMHQSLACHDIDYLITDFKLDPDVEEQFKTHQITCLY |
| 3BWG Chain:A ((8-236)) | QQIATEIETYIEEHQLQQGDKLPVLE-----TLMAQF-EVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGY-ISLLSNQGDFNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLN---------------------EEEAEYLGLEAGLPKLYIESIFHLTNG--------QPFDYSKISYNYEQSQFVVQANS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40695 for 1477 contacts (-27.6/contact) +
2D Compatibility (PS) -22154 + (NN) 855 + (LL) 3676
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -64418.0 ( -43.61 by residue)
QMean score : 0.233
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