Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNEL----EVGELGADGYLLFVMTP--E--EKITMPIRAFEPNQKLAFEWDQ---------DEVAFELNEITANKTRLTFTEQLTTITEH--SPRDISGWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
3PUT Chain:A ((5-154))
--------SAEHTTFVIERRLTAPVARVFRAWSTPESKRQWFACHVPLEYALDFRPGGTERNYTADTDGLLHAYDARYIDIVPDTRIIYAYEMKLGQTRISASLVTVAFDVEP-SGTRMVFTEQVVFLDGYGDNGARLQGTEIGLDNLELFLVRET-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3PUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41477 for 857 contacts (-48.4/contact) +
2D Compatibility (PS) -13806 + (NN) 954 + (LL) 2928
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -56901.0 ( -66.40 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3PUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PUT-query.scw
PDB file :
Tito_Scwrl_3PUT.pdb
: