Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMEKKHFDLNDVVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCGHSVMIPRREFERKVKKILVKAEQE
1I50 Chain:L ((25-70))
---------------ATLKYICAECSSKLSLSRTD-AVRCKDCGHRILLKAR------TKRLVQFEAR
General information:
TITO was launched using:
RESULT:
Template:
1I50.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6129 for 219 contacts (-28.0/contact) +
2D Compatibility (PS) -4783 + (NN) -2797 + (LL) 2288
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -13621.0 ( -62.20 by residue)
QMean score : -0.033
(partial model without unconserved sides chains):
PDB file :
Tito_1I50.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I50-query.scw
PDB file :
Tito_Scwrl_1I50.pdb
: