Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MTDKKIVYYFDHDLSKKDMGGVGPTYTGKNLL---FLLWWTYSYVAEDNLDID-TSLFEVPEFNDFYNNGLELYRI------KNELANYNIRFGYEVNPKDSTKMLIGILPTDEEDYVKGYRNFIADISNPDTRYAIYHRLIKTMDTMLPIEQINVYKSLAKGNKK--------- |
| 1JX4 Chain:A ((2-204)) | IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRI-MNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKN------KVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33165 for 931 contacts (-35.6/contact) +
2D Compatibility (PS) -15158 + (NN) 1714 + (LL) 264
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -53245.0 ( -57.19 by residue)
QMean score : 0.120
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