Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKLIKLKKIVQIERKP-------FFITRQKLKLFR--------IVFNIIFVLMLFYYWSAI-PLLLPRLI-V-V-IFLLGSIFLTNKAFIAIKK--------RI-GKTL-FIRERLWYILESLK--------------------------------------LYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKN----LEDNLVAGLGLPLLSKKELPNCVIYQLG----HIEEIEQYVF-------------NNNLTRKFFQSISSPVIKLSN-TQQFSLKSNTNIGVYGRTGTGKTIA--------LQWF-------------L-FNALAK----------GCGTDDS-TYLGIVDGKGADLYAL-----------GKLLQEELGEQIAIGSSPQML----AKLSREFVDIMNARFEVIKQNSSLNADAYDLEMTPNFL--------------------------FVDELASIRDSCGSSKQGKELW---------NEILQNLGLIARK-GRQAGCHL-LLSTQDPNAENIPVELRNQISA-----VLYLGNPG-AD-RLK-MAFSMCELENVPTV----SDRKGEALFHADGL-NSIEPVLT-IVP-FVDVKTKQDFLQIVRNILPNY------- |
| 4K17 Chain:A ((10-669)) | PRELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARIPSKLELTFSYLEIHGVICHKPAQMVVETEKCNMSMKMVSPEDVSEVLAHIGTCLRRIFPGLSPLRIMKKVSMEPSERLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYKEEVQWDVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAA-LEYNQWFTKLSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRIDFAQKLAGALAHNPNSGLHTINLAGNSLEDRGVSSLSIQFAKLPKGLKHLNL-SKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNALRGDDLSHMYNFLAQPNTIVHLDLSNTECSLEMVCSALLRGCLQCLAVLNLSRSVFSHRKGKEVPPSFKQFFSSSLALIQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELGHCLRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLKAEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDAAQALKTNPEKTEEALQKIENYLLRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182595 for 3004 contacts (-60.8/contact) +
2D Compatibility (PS) -46445 + (NN) -3417 + (LL) -76
1D Compatibility (HY) -5200 + (ID) 3550
Total energy: -241283.0 ( -80.32 by residue)
QMean score : 0.264
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