Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKTKFSDPLEQLAKKRKRKTLFKTVVLALITVLLVVGIAFK--GFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYYQPSGQFTG----KVHADRFKDIDGVQIPYSSFEENYSISGTFGTNADEKSEKNGLYDR-------------------------------GTRQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNND------LIEIAITFDKSYSYKEIKTMIPNNIKQNWLWIGTS-------------TELDTSYWPTKYQF----------GTDPETLNTPQIFIDKIKENLKGNSKVYFNNINIYSDLEKYAKKY-DKVNNSDKLKFSGIILTGKAENFKQLKE--KEWVHASSIGANIEYKPYYKLDKE------------------------ |
| 2WM9 Chain:A ((5-427)) | STPELRKTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEADVHFNEDVLMELLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAYSKVTEVMHSGRRLLGTYFRVAFFGQGFFEDEDGKEYIYKEPKLTPLSEISQRLLKLYSDKFGSENVKMIQDSGKVNPKDLDSKYAYIQVTHVIPFFDEKELQERKTEFERSHNIRRFMFEMPFTQTGKRQGGVEEQCKRRTILTAIHCFPYVKKRIPVMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSAEVDMIKLQLKLQGSVSVQVNAGPLAYARAFLDDD-NKVKLLKEVFRQFVEACGQALAVNERLIKEDQLEYQEEMKANYREMAKELSEIMHEQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5906 for 2027 contacts (2.9/contact) +
2D Compatibility (PS) -32044 + (NN) 3467 + (LL) 144
1D Compatibility (HY) -4800 + (ID) 2300
Total energy: -29627.0 ( -14.62 by residue)
QMean score : 0.199
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