Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILDDYEKELLVISHQIIAYLIKSGVNPSQAQDVTQDVFLQILESDFSLPLDKIKAWMYRTTIRRYIDLYRRNKRYNEILQKEFFIENNLYYTESEKFFELHEAILHLKKDYQTLIDLYYFNDFSIKEISEITGQSQSTIKIRLMRARREVKKYLEKDNFKI
2O8X Chain:A ((5-61))
-------------------------------------------------------------------------------------------------DLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLA---------
General information:
TITO was launched using:
RESULT:
Template:
2O8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20253 for 375 contacts (-54.0/contact) +
2D Compatibility (PS) -6345 + (NN) -2567 + (LL) 9104
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -23111.0 ( -61.63 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2O8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O8X-query.scw
PDB file :
Tito_Scwrl_2O8X.pdb
: