Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQK-DGKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQS-LNLSVSPLKGKIGNNKDGLEY-LLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 3VV5 Chain:A ((31-257)) | ----------------------EIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGVIVSRKGG-PRTAKDLQGKVVGVQVGTTYMEAAQKIP---G---IKEVRTYQ-R--DPDALQDLLAGRIDTWITDRFVAKEAIKERKLENTLQ--VGEL---V-FQERVAMAVAKGN--KSLLDALNRALAELMQDGTYARISQKWFGEDVRCK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65752 for 1875 contacts (-35.1/contact) +
2D Compatibility (PS) -24586 + (NN) -9852 + (LL) 2412
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -107528.0 ( -57.35 by residue)
QMean score : 0.495
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