Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLK-----------YRTVVEEIDEL----YRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEAD-SVELSLVRQGATINIEMIDNGCGFTNLDGDEFHSIQERLTIVEGTLTILSRSK-PTHIQVVLKEV |
| 3JZ3 Chain:A ((40-214)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALLQLH-GIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAH-SIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNA--D--NFIVRDNGP-------LGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSWLEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55671 for 910 contacts (-61.2/contact) +
2D Compatibility (PS) -13915 + (NN) -609 + (LL) 19260
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -54685.0 ( -60.09 by residue)
QMean score : 0.451
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