Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAYSNIALNKSLKKSRLSDKDRALVTEIVYGTVARKITLEWYLSHFIVDRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNKKGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLFERNKASLRVTDLS-QKQTIKETLN---VR--------------------DSHIAETALVADS-GNFASTSFFQDGLITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYLT-TGAVTALDLYDHKLELVMENAKRLGLSDKIKTKKLDASKAHEYF-LEDTFDKILVDAPCSGIGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGIITYSTCTIFEEENFQVIEKFLENHPN-FEQVELSH-TQ-----EDIVKRGCISISPEQYHTDGFFIGQVKRIL |
| 2B9E Chain:A ((9-301)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC-CELAEEDFLAVSPSDPRYHEVHYILLDPSCSG----------------VRLHALAGFQQRALCHALTF-PSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81702 for 1968 contacts (-41.5/contact) +
2D Compatibility (PS) -25583 + (NN) -7700 + (LL) 16680
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -114255.0 ( -58.06 by residue)
QMean score : 0.438
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