Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIM--S-LMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFA---MEGDIILAEPQALVGFAGRRVIETTVR-EDL-----------------PEGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
| 1VRG Chain:A ((289-513)) | -----------------------------------------------------------NPNKGYDVRDVIKRVVDHGEFFEVQPY------------------------FAKNIVIGFARIQGKTVGIVANQPSVLAGVLDIDSSDKAARFIRFLDAFNIPILTFVDTPGYLPGVAQEHGGIIRHGAKL---LYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDPRETRKYIMRALEVCETKVEYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137634 for 1642 contacts (-83.8/contact) +
2D Compatibility (PS) -22078 + (NN) -12133 + (LL) 5032
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -176663.0 ( -107.59 by residue)
QMean score : 0.373
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