Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAERDYFASEG---ESDPERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
2K6L Chain:A ((1-51))
--------------MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEDAVRAYLFERAVE-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2K6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6828 for 192 contacts (35.6/contact) +
2D Compatibility (PS) -5533 + (NN) -3891 + (LL) 3104
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -1442.0 ( -7.51 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2K6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K6L-query.scw
PDB file :
Tito_Scwrl_2K6L.pdb
: