Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVVFLKILVPLVSLVFLISLGITILAGVLGAVGGSQSNCTIEVVTSTSTDSSISSGDGSIDSFVKEHKEAYILSWKAGGFLPSASITQTMIENGFNFTNPNGTSLWQAHNMGGVKTSSKSNFPVTLATYGQDSVDLSGTKPGARVGDGTGGAYTWFSSYDAGIVGKAEFMAHQTLYTKAINNIDGIATLSAIADGGWATDGTYKTKLIDMYHKLGKTYEWLDKEAISAHGDKPYKATTASAGDAG-LSDIFTSNSKDCSDSSSGGATDGTGTVPADAIAWGYRPDNLPESLKQYIID-PKSLGMAYANSSGWFNPGSDYLAGQCV--NLTISLGNHLWGHSGSVSGNGKDQAGAWANIFGNSVKTTPKRGAIFSTQNGGGGYGHTGIVCHVFENGSILIVEQNTPLSGADYFKKSYTWNYRIWTPAQQKAEVISFAYPYGKEPKLGN |
| 1QGT Chain:A ((1-142)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPE--------HCSPHHTALRQAILCWGELMTLATWVGNNLEDPASRDLVVNYVNTNMGLKIRQLLWFHISCLTF-GRETVLEYLVSFGVWIRTPPAYRPPNAPILST-------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 9110 for 892 contacts (10.2/contact) +
2D Compatibility (PS) -14272 + (NN) -1198 + (LL) 15960
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: 3500.0 ( 3.92 by residue)
QMean score : 0.121
|
|
|