Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESETTDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
| 3VEM Chain:A ((1732-1813)) | -----------------------------------------FNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFLS----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11370 for 330 contacts (34.5/contact) +
2D Compatibility (PS) -8501 + (NN) 1009 + (LL) 8520
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 10248.0 ( 31.05 by residue)
QMean score : 0.192
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