Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISNQELTLTPLRGKSGKAYIGTYPNGERVFVKYNTTP-----------ILPALAKE-Q-IAPQLLWARRTS--NGDMMSAQEWLDGRTLTKED--------MG--SKQIIHILLRLHKSRPLVNQLLQLGYKIENPYDLLMDWEKQTPIQI---RENTYLQSIVTELKRSLPE--FRTEVATIVHGDIKHSNWVITTS-GL-IYLVDWDSVRLTDRMYDVAYILSHY--IPQKHWKDWLSYYGYKDNEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIYELRKFRELIKKHNAS |
| 3SG8 Chain:A ((28-295)) | -----------SGEGNDCIAYEI----NRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLV----LDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEEGLNEIRSA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78207 for 1629 contacts (-48.0/contact) +
2D Compatibility (PS) -24073 + (NN) -3247 + (LL) 2200
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -114577.0 ( -70.34 by residue)
QMean score : 0.353
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