Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MIANQT--IVDIVTQVVTP---AIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVV-SPLLDTIQPDP---FPEQYMLEVSSPGLER-----------PLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYM-DKTRHKTVDIPYQTVAKARLAVKL
4MGX Chain:A ((1-185))
QKVRAWGPGLETGQVGKSADFVVEAIGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHILPAPPDCFPDK--VKAFGPGLEPTGCIVDKPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGD------GTFRCSYVPTKPIKHTIIISWGGVNVPKSPFRV
General information:
TITO was launched using:
RESULT:
Template:
4MGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37287 for 1026 contacts (-36.3/contact) +
2D Compatibility (PS) -16039 + (NN) -768 + (LL) 508
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -59336.0 ( -57.83 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_4MGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGX-query.scw
PDB file :
Tito_Scwrl_4MGX.pdb
: