Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGP-NLTKKVTDKSNYYKTEVSTVF-STLELSDALGKP---RKVVAVADAGFSKKMRTLMA
3J7A Chain:R ((22-132))
---VTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFLSDVCSEPAYKKLITTLCAE------MVQNDSKDLGHWAGLFIIGASSVAVVDFGEDSAEKDFLL
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54610 for 613 contacts (-89.1/contact) +
2D Compatibility (PS) -9991 + (NN) -6099 + (LL) 524
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -74026.0 ( -120.76 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: