Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKKLLRKEVLITLKSQPQAYKSEVDCKLLEAFIKTKAYQNSCVIATYLSFDYEYNTQLLIKQALCDGKRVLVPKTYPKGKMIFVDYQKDNLRATPFGLLEPVNDRAVEKASIDLIHVPGLIFNNKGFRIGYGAGYFDRYLSDFEGDTISTIYRCQRQDFVE-EKHDVAVKEVLCL-------------------
1SOU Chain:A ((1-194))
MLKSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLKE-KELILPKVEGNEISLYRVHSPACLGVGAFGIMEPVEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVKGLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRRLRDGRSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
1SOU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66736 for 1330 contacts (-50.2/contact) +
2D Compatibility (PS) -18395 + (NN) -5298 + (LL) -172
1D Compatibility (HY) -12000 + (ID) 2200
Total energy: -104801.0 ( -78.80 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_1SOU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SOU-query.scw
PDB file :
Tito_Scwrl_1SOU.pdb
: