Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MTKEKMMSFMTIASIALLGSGVVCANDVADPVA--GTTDVVVV---PVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVI----PEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKL--EVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 4D79 Chain:A ((3-268)) | VVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGV-GSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGL------AKAEVMAERIRQINPEC--RVTVVDDFVTPDN--------VAQYMSVGYSYVIDAIDSVRPKAALIAYCRRN-----------------KIPLVT-TGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPGFGAATMVTATFGFVAVSHALKKMMAKAARQG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17811 for 1757 contacts (10.1/contact) +
2D Compatibility (PS) -23914 + (NN) -15056 + (LL) 1436
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -27523.0 ( -15.66 by residue)
QMean score : 0.220
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