Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSK-ESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSKREIEQLCQVIPEIKKSLP-LEICLTA--------GFLDREQLHQLKQAGIDRINHNLNTPEENYPNIATTHSFKDRCDTLERIHNE--DIDVCSGFICGMGESDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAGREVHFENFESLVTLLVDSTFLGNYLTEGGRNQHTDIEFLEKLQLNHTKKELI |
| 4U0O Chain:B ((8-288)) | PSWLRISTVQRLVRQYGIHTICEE------GRCPNRGECYGQK------------TATFLLLGPT--CTRACAFCQVEKGHAPAAVD-----PEEPTKIAAAVATLGLRYVVLTSVARDDLPDQGAGQFVATMAAIRQRCPGTEIEVLSPDFRMDRGRLSQRDCIAQIVAAQPACYNHNLETVRRLQGPVRRGATYESSLRVLATVKELNPDIPTKSGLMLGLGETEAEIIETLKDLRRVGCDRLTLGQYLPPSLSHLPVVKYWTPEEFNTLGNIAREL--------------GFSHVRS--GPLVRSSY-------------------------HAAE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95417 for 2192 contacts (-43.5/contact) +
2D Compatibility (PS) -28579 + (NN) -16698 + (LL) 5436
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -148008.0 ( -67.52 by residue)
QMean score : 0.334
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