Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDFA-VSAPEIVLAAGAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGHLTQTVNERPIYPRALQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAKGRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALE-LDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1LUC Chain:A ((1-355)) | ------MKFGNFLLTY-QPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNE-HIKFPKIQLNPSAYTQGGAPVYVVAESASTTEWAAERGLPMILSWII-NTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIF-RIDYSYEIN--------PVGTPEECIAIIQQDIDAT-GIDNICCGFEANG-SEEEIIASMKLFQSDVMPYLKEKQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144042 for 2745 contacts (-52.5/contact) +
2D Compatibility (PS) -33694 + (NN) -5635 + (LL) 1336
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -198635.0 ( -72.36 by residue)
QMean score : 0.480
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