Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MSNVKKRPEVLSPAGTLEKLKVAIDYGADAVFVGG-QAYGLRSRAGNFSMEELQEGINYAHARDAKVYVAANMVTHEGN-----ELGAGPWFRELRDMGLDAVIV-----SDPALIVICATEAPGLEIHLSTQASSTNYETFEF-WKEMGLTRVVLAREVTMAELAEIR------------------KRTDVEIEAFVHGAMCISYSGRCVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERQSLKGEIPEPFSMSAVDMCMIEHIPDMIENGVDSL-----KIEGRMKSIHY---VSTVTNCYKAAV--------DAYMESPEAFEAIKEDLIDELWKVAQRELATGFYYHTPTENEQLFGARRKIPQYKFVGE--VVSFDNAKMEATIRQRN-----------------VIMEGDRVEFYGPGFRHFECFIDGLRDAEG--NKIDRAPNPMELLTITLPNPVKKGDMIRACKEGLVNLYQNDGTSKTVRA-------------- |
| 1B1Y Chain:A ((1-500)) | MKGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFLDAGVIVDIEVGLGPAGELRYPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAV-----------GH--PEWEFPNDAGQYNDTPERTQFFRDNGTYLSEKGRFF-LAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKIAGVHWWYKVP--SHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQPPDAMSAPEELVQQVLSAGWRE-GLNVSCENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEGQNYVNFKTFVDRMHANLPRDPYV----DPMAPLPRSGP-EISIEMILQAAQPKIQPFPFQEHTDLPVGPTGGMGGQAEGPTCG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83837 for 3237 contacts (-25.9/contact) +
2D Compatibility (PS) -41562 + (NN) 6398 + (LL) 608
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -132143.0 ( -40.82 by residue)
QMean score : 0.308
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