Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKNIGDVSYFRLNNEINRPVNGQIPLHKDKEALTAFFKENVQPNSKAFDSITDKIAYLLKYDYLEEAFLNKYRPEFIEELSTKLFDKKFRFKSFMAAYKFYQQYALKTNDGEYYLESIEDRVLFNALYFADGDEKLATDLALEMISQRYQPATPSFLNAGRSRRGELVSCFLIQVTDD-MNAIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGFAGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLDVFHPDIISFLSTKKENADEKVRVKTLSLGITVPDKFYELARNNQEMYLFSPYS---IEREYGVPFSYIDITEKYDELVANPNITKTKINARDLETEISKLQQESGYPYIINIDTANR--TNPIDGKIIMSNLCSEILQVQKPSLINDAQEYLEMGTDISCNLGSTNVLNMMTSP------DFGKSIKTMTRALTFVTDSSNIEAVPTIKNGNAQAHTFGLGAMGLHSYLAKNHIEYGSPESIEFTDIYFMLMNYWTLVESNNIARERQTTFVGFEKSKYADGTYFDKYVSGKFVPQSDKVKSLFANHFIPEAKDWENLRYAVMKDGLYHQNRLAVAPNGSISYINDCSASIHP------------ITQRIEER--QEKKIGKIYYPANG-------LATDTIPYYTSAYDMDMRKVIDVYAAATEHVDQGLSMTLFLRSELPKELYEWKTESKQTTRDLSILRNYAFNKGVKS-IYYIRTFTDDGSEVGANQCESCVI |
| 3K8T Chain:A ((90-746)) | ------TTKQFSKVVEDLYRYVNAA--TGKPAPMISDDVYNIVMENKDKLNS---AIVYDRDFQY-----------------------------SYFGFKTLERSYLLRING--QVAERPQHLIMRVALGIHGRDIEAALETYNLMSLKYFTHASPTLFNAG-TPKPQMSSCFLVAMKEDSIEGIYDTLKECALISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGP--GAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLSDCYG-----DEFEALYTRYEKEGR--GKTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNLGVIKSSNLCCEIV------------EYSAPDETAVCNLASVALPAFIEKTSTYNFKKLHEIAKVVTRNLNRVIDR-NYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKDGP-YETFQGSPASQGIL-----------QFDMWDQKPYGMW-----DWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYQVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVYIDQSHSLNLFLR--------------APTMGKLTSMHFYGWKKGLKTGMYYLRTQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233682 for 5399 contacts (-43.3/contact) +
2D Compatibility (PS) -63839 + (NN) -13945 + (LL) 7376
1D Compatibility (HY) -31200 + (ID) 7700
Total energy: -342990.0 ( -63.53 by residue)
QMean score : 0.397
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