Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAVGHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVT---GLKEMLWSVDTEDWKNHNTQAMMTNIKK----QL-RPGGVILMHDIHQTSIDA-LPTIMDYLITQGYYFVTVGELYSTP |
| 2Y8U Chain:A ((31-223)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPNTIALTFDDGPSEY-TPQLLDLLSRYSARATFFVLGDAAAQNPGLLQRMRDEGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYLETNELVLQVMRDLDYRVISASVDTKDYENQDADAIINTSFQLFLDQLDAGGNIVLAHDIHYWTVASLAERMLQEVNARGLIATTVGDCLGDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72939 for 1531 contacts (-47.6/contact) +
2D Compatibility (PS) -19715 + (NN) -9066 + (LL) 18276
1D Compatibility (HY) -14000 + (ID) 3500
Total energy: -100944.0 ( -65.93 by residue)
QMean score : 0.418
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