Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTHINITLDMG-ETSKDLRIPLKISVKQLVMELDSIFSRTERRTKYQLRVINKGILLGENDILAHHPVTTGDRIRIEEFY
3RT3 Chain:B ((3-74))
----WDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVH--AFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDK
General information:
TITO was launched using:
RESULT:
Template:
3RT3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59831 for 463 contacts (-129.2/contact) +
2D Compatibility (PS) -7247 + (NN) 640 + (LL) 428
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -71010.0 ( -153.37 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3RT3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RT3-query.scw
PDB file :
Tito_Scwrl_3RT3.pdb
: