Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPQTLRRLDVKKQFIEKIEPFAHRQTLKSKAVNSSKTTMSIQRYNHSGTKIQLRIGYSKVLIRIFSNGKINLTHYDLF-FDREETLEITDAFDNGVYTQDEVDGFIKQAKTFIKQALKGEV-- |
1GA3 Chain:A ((1-113)) | --GGPVPPSTALRELIEELVNITQNQK-APLCNGSMVWSINLTA--------GMYCAALESLINVSGCSAIEKTQRMLSGFCPHKVSAGQFSSLHVRDTKIEVAQFVKDLLLHLKKLFREGRFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6085 for 751 contacts (-8.1/contact) +
2D Compatibility (PS) -11306 + (NN) 160 + (LL) 612
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -19019.0 ( -25.32 by residue)
QMean score : ?
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