Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNV----------DNYAGHFTFG-QGEEELGIFGHLDVVPAGSGWDTDPYEPVIKDNRLYARGS----SDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAHGS-TPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDE--TN--DDNTIALNFRYPQGTDAKTIQTKLEKLNGVE------KVTLSD-HEHTPHYVPMDDELVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLE-RGVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
| 3GB0 Chain:A ((3-373)) | ----------INQERLVNEFMELVQVDSETKF------------EAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGN-----GIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAKYGYALDSDG-----KVG------------------------------------------------------EIVVAAPTQ-----AKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGR-----------------------------IDSETTANIGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-IGRTPSLHQSGGGSDANVIAGHGIPTVNLAVGY-EEIHTTNEKIPVEELAKTAELVVAIIEEVAK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55722 for 2924 contacts (-19.1/contact) +
2D Compatibility (PS) -37681 + (NN) -19597 + (LL) 5732
1D Compatibility (HY) -5200 + (ID) 3350
Total energy: -115818.0 ( -39.61 by residue)
QMean score : 0.398
|
|
|