Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYSEIMIRYGELSTKKKNRMRFINKLKNNMEHVLSIYPDVSVKTDRDRGHVYLNGTDYHEVAESLKEIFGIQAFSPSFKVEKNVDTLVKAVQEIMTSVYKDGMTFKITAKRSDHSFELDSRALNHTLGDAVFSVLPNIKAQMKQPDINLKVEIRDEAAYISYENIRGAGGLPVGTSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAHDLTRKLTKFGGNIQ-FIEVPFTEIQEE-IK-----EKA--PEAYL--MTLTRRFMMRITDRIRENRNGLVIINGESLGQVASQTLESMQAINAVTATPIIRPVV--TM-----DKLEIIDIAQKIDTFDISIQPFEDCCTIFAPDRPKTNPKIKNTEQYEKRMDVEGLVERAVAGIMVTTIQPQADSDDVDDLIDDLL |
| 2NZ2 Chain:A ((5-173)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQ---KEDFEEARKKALKL---G--AKKVFIEDVSREFVEEFIWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGN-DQVRFELSCYSLAPQIKVIAPWRMPEFYNRFK-RNDLMEYAKQHGIPIPVTPKNPWSMDENLMHISYEAGILENPKNQAPPGLYTKTQDPAKAPNTPDILEIEFKKGVPVKVTNVKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58305 for 1120 contacts (-52.1/contact) +
2D Compatibility (PS) -16526 + (NN) -8849 + (LL) 12228
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -77552.0 ( -69.24 by residue)
QMean score : 0.481
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